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Gene Gene Pair Fusion transcript ID Chromosomal band Tissue Type	Adipose Adrenal cortex Adrenal medulla Bone Bone marrow Brain Breast/Mammary Gland Cartilage Cerebellum Cerebrum Cervix Colon Ear (inner) Embryonic tissue Endocrine Esophagus Eye Gastrointestinal tract Genitourinary system Germ cell Head and neck Heart Kidney Limb Liver Lung Lymph node Lymphoreticular Mammary Gland/Breast Muscle Nervous Ovary Pancreas Pancreatic islet Parathyroid Peripheral nerve Pineal gland Pituitary gland Placenta Prostate Retina Salivary gland Skin Soft tissue Spleen Stem cell Stomach Synovium Testis Thymus Thyroid Uterus Vascular White Blood Cells Whole body Uncharacterized tissue
examples) Gene - TMPRSS2 , Gene pair - TMPRSS2:ETV1 , Fusion transcript ID - DQ204770 ,                 Chromosomal band - 22q11 , Tissue type - Lung

Transcript Source

Source database : GenBank mRNA GenBank EST 454 seq. from SRA

Aberration type : Inter-chromosomal translocation Intra-chromosomal deletion

Annotation Source

OMIM PubMed Sanger CGP Mitelman Database of Chromosome Aberrations in Cancer

Alignment Information

Predefined Classes (Help)             CLASS :       A         B         C

Detailed Search

Head Gene : Tail Gene : Number of Exons : Multiple Single Both check for intact(full) exon at the break point check for alignment length requirement     (80bp for multiple exons, 50bp for single exon) Allow intron overlap Number of Exons : Multiple Single Both check for intact(full) exon at the break point check for alignment length requirement     (80bp for multiple exons, 50bp for single exon) Allow intron overlap

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